java characterdata_Java CharacterData.getFile方法代码示例

比眉伴天荒 2022-11-11 05:10 115阅读 0赞

import mesquite.lib.characters.CharacterData; //导入方法依赖的package包/类

/\*\* Called to alter file. \*/

public boolean processFile(MesquiteFile file)\{

if (saveFile == null || okToInteractWithUser(CAN\_PROCEED\_ANYWAY, "Asking for file to save"))\{ //need to check if can proceed

MesquiteFileDialog fdlg= new MesquiteFileDialog(containerOfModule(), "Output File for Matrices(s)", FileDialog.SAVE);

fdlg.setBackground(ColorTheme.getInterfaceBackground());

fdlg.setVisible(true);

String fileName=fdlg.getFile();

String directory=fdlg.getDirectory();

// fdlg.dispose();

if (StringUtil.blank(fileName) || StringUtil.blank(directory))

return false;

saveFile = MesquiteFile.composePath(directory, fileName);

tempFile = MesquiteFile.composePath(directory, MesquiteFile.massageStringToFilePathSafe(MesquiteTrunk.getUniqueIDBase() + fileName)) ;

if (AlertDialog.query(containerOfModule(), "Alter names?", "The matrices found in the files of the selected folder will be accumulated into a single NEXUS file. All taxa will be accumulated into a single block."

\+"In case the different files have variants of taxon names, do you want to alter the names of each matrix as it is read?", "Alter Names", "No"))

nameAlterer = (TaxonNameAlterer) hireEmployee(TaxonNameAlterer.class, "How do you want to alter the names of taxa in each matrix?");

if (saveFile == null)

return false;

Listable\[\] matrices = proj.getFileElements(CharacterData.class);

if (matrices == null)

return false;

for (int im = 0; im < matrices.length; im++)\{

CharacterData data = (CharacterData)matrices\[im\];

if (data.getFile() == file)\{

checkTaxonList(data, saveFile);

writeMatrixToFile(saveFile, data, file.getFileName());

writeMatrixToFile(tempFile, data, file.getFileName());

return true;

java characterdata_Java CharacterData.getFile方法代码示例

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